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fix: update fhir-converter to dotnet 8 #3080

Merged
merged 3 commits into from
Jan 3, 2025
Merged

fix: update fhir-converter to dotnet 8 #3080

merged 3 commits into from
Jan 3, 2025

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mcmcgrath13
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@mcmcgrath13 mcmcgrath13 commented Dec 18, 2024

PULL REQUEST

Summary

Pull in latest updates from upstream Microsoft FHIR Converter, including updgrade to dotnet 8, which requires updating the dockerfile for the service. Corresponds to skylight-hq/FHIR-Converter#25

Related Issue

Fixes #3060

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codecov bot commented Dec 18, 2024

Codecov Report

All modified and coverable lines are covered by tests ✅

Project coverage is 85.14%. Comparing base (7b7e8be) to head (98a718f).
Report is 14 commits behind head on main.

Additional details and impacted files
@@            Coverage Diff             @@
##             main    #3080      +/-   ##
==========================================
- Coverage   86.54%   85.14%   -1.41%     
==========================================
  Files         215      189      -26     
  Lines       13432    10945    -2487     
  Branches      668      705      +37     
==========================================
- Hits        11625     9319    -2306     
+ Misses       1798     1617     -181     
  Partials        9        9              
Flag Coverage Δ
ecr-viewer 90.02% <ø> (+1.20%) ⬆️
fhir-converter 78.83% <ø> (ø)
ingestion 64.08% <ø> (ø)
message-parser 96.53% <ø> (ø)
message-refiner 92.85% <ø> (ø)
orchestration 85.67% <ø> (ø)
record-linkage ?
trigger-code-reference ?
validation 90.10% <ø> (ø)

Flags with carried forward coverage won't be shown. Click here to find out more.

see 51 files with indirect coverage changes


# Download FHIR-Converter
RUN git clone https://github.com/skylight-hq/FHIR-Converter.git --branch v7.0-skylight-18 --single-branch /build/FHIR-Converter
RUN git clone https://github.com/skylight-hq/FHIR-Converter.git --branch mcm/dotnet-8 --single-branch /build/FHIR-Converter
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todo: update to release version before merge

@austin-hall-skylight
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I ran the integration tests and convert-seed-data and didn't have any issues. I think that should cover it since there's no code changes on this end to review, right?

@mcmcgrath13
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I ran the integration tests and convert-seed-data and didn't have any issues. I think that should cover it since there's no code changes on this end to review, right?

Yeah, it's just the dockerfile here. The main outstanding question is performance and the tradeoffs since the latest changes seem to be slower even though they should be newer and shinier

@mcmcgrath13 mcmcgrath13 added this pull request to the merge queue Jan 3, 2025
Merged via the queue into main with commit ea9e9f2 Jan 3, 2025
36 checks passed
@mcmcgrath13 mcmcgrath13 deleted the mcm/dotnet-8 branch January 3, 2025 21:06
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Update FHIR Converter to dotnet 8
2 participants